public class SBMLSpeciesReference extends SBMLSimpleSpeciesReference
id, name, species
documentNode, sbmlModel
Constructor and Description |
---|
SBMLSpeciesReference(de.unirostock.sems.xmltools.ds.DocumentNode documentNode,
SBMLModel sbmlModel) |
Modifier and Type | Method and Description |
---|---|
String |
report() |
String |
reportDelete(de.unirostock.sems.bives.markup.MarkupDocument markupDocument) |
String |
reportInsert(de.unirostock.sems.bives.markup.MarkupDocument markupDocument) |
String |
reportMofification(de.unirostock.sems.bives.algorithm.ClearConnectionManager conMgmt,
SBMLSpeciesReference a,
SBMLSpeciesReference b,
de.unirostock.sems.bives.markup.MarkupDocument markupDocument) |
getSpecies, reportMofification
getAnnotation, getMetaId, getNotes, getSBOTerm, reportAnnotation, reportNotes
getDocumentNode, getModel
public SBMLSpeciesReference(de.unirostock.sems.xmltools.ds.DocumentNode documentNode, SBMLModel sbmlModel) throws BivesSBMLParseException
documentNode
- sbmlDocument
- BivesSBMLParseException
public String reportMofification(de.unirostock.sems.bives.algorithm.ClearConnectionManager conMgmt, SBMLSpeciesReference a, SBMLSpeciesReference b, de.unirostock.sems.bives.markup.MarkupDocument markupDocument)
public String reportInsert(de.unirostock.sems.bives.markup.MarkupDocument markupDocument)
reportInsert
in class SBMLSimpleSpeciesReference
public String reportDelete(de.unirostock.sems.bives.markup.MarkupDocument markupDocument)
reportDelete
in class SBMLSimpleSpeciesReference
public String report()
report
in class SBMLSimpleSpeciesReference
Copyright © 2014 SEMS project @ University of Rostock. All rights reserved.